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@freva-org/data-inspector

v3.1.0

Published

NetCDF / Zarr file inspection dialog — framework-agnostic Web Component

Readme

@freva-org/data-inspector

npm CI License: BSD 3-Clause

NetCDF / Zarr file inspection dialog as a framework-agnostic Web Component. Works in React, Vue, Svelte, Angular, plain HTML, and Django templates — anything that can load a JS module.

Styling is self-contained. The component ships its own modal CSS (injected into <head> once) and inline SVG icons, so its own chrome needs no external Bootstrap or Font Awesome. Only the aggregation-config sub-form still uses a few Bootstrap utility classes, so load Bootstrap CSS v5 if you use aggregation mode and want that form fully styled.

Install

npm install @freva-org/data-inspector

Quick start

import "@freva-org/data-inspector";
<data-inspector id="inspector" file="/data/myfile.nc"></data-inspector>
const el = document.getElementById("inspector");

el.addEventListener("inspector-submit", ({ detail: { file, aggregationConfig } }) => {
  loadMetadata(file, aggregationConfig);
});

el.addEventListener("inspector-close", () => el.removeAttribute("open"));

el.setAttribute("open", ""); // open it

Usage with ZarrPoller

import { ZarrPoller, NcDumpDialogState } from "@freva-org/data-inspector";

el.addEventListener("inspector-submit", async ({ detail: { file, aggregationConfig } }) => {
  el.setAttribute("status", NcDumpDialogState.LOADING);

  try {
    const { html, zarrUrl } = await myBackend.inspect(file, aggregationConfig);

    el.output = html;
    el.setAttribute("zarr-url", zarrUrl);
    el.setAttribute("status", NcDumpDialogState.READY);

    const poller = new ZarrPoller(zarrUrl, {
      onStatus: (code, reason) => {
        el.setAttribute("zarr-status-code", String(code));
        if (reason) console.warn("zarr status:", reason);
      },
      onError: (err) => console.error(err),
    });
    poller.start();
  } catch (e) {
    el.setAttribute("status", NcDumpDialogState.ERROR);
    el.setAttribute("error", String(e));
  }
});

Framework examples

import "@freva-org/data-inspector";
import { useRef } from "react";

export function Inspector({ file }: { file: string }) {
  const ref = useRef<HTMLElement>(null);
  return (
    <data-inspector
      ref={ref}
      file={file}
      open
      onInspector-submit={(e) => handleSubmit(e.detail)}
      onInspector-close={() => setOpen(false)}
    />
  );
}
<template>
  <data-inspector
    :file="file"
    :open="open || undefined"
    @inspector-submit="handleSubmit"
    @inspector-close="open = false"
  />
</template>

API

<data-inspector> attributes

| Attribute | Type | Description | | ------------------ | --------------------------- | ------------------------------------------------- | | open | boolean | Controls visibility | | file | string \| JSON string[] | Single path or JSON-encoded array for aggregation | | status | ready \| loading \| error | Current operation status | | error | string | Error message to display | | zarr-url | string | Presigned Zarr URL for GridLook | | zarr-status-code | number | Status code from ZarrPoller.onStatus | | is-aggregation | boolean | Enables aggregation mode |

<data-inspector> JS property

| Property | Type | Description | | -------- | ---------------- | --------------------------------------------------------- | | output | string \| null | HTML string from xarray repr (too large for an attribute) |

error and file are rendered as text (never parsed as HTML). output is injected as HTML, so pass only trusted markup — the xarray repr from loadZarrMetadataHtml / buildXarrayRepr is safe; arbitrary remote HTML is not.

GridLook 3D viewer

The viewer is shown in a sandboxed iframe (sandbox="allow-scripts allow-same-origin allow-popups allow-downloads", referrerpolicy="no-referrer"). The iframe is created once on first view and reused, so switching tabs or other re-renders no longer reload it. The Zarr URL is placed in the viewer's URL fragment verbatim (GridLook reads location.hash as-is):

https://gridlook.pages.dev/#<zarr-url>

The URL is never interpolated into HTML — it is assigned via the iframe src property and shown via textContent — so a raw value cannot inject markup or attributes.

Path / Zarr rows

The header shows the inspected path. A separate Zarr: row appears only when the resolved zarr-url genuinely differs from file (i.e. a real server-side conversion produced a new store URL). When the input is already a Zarr store (zarr-url === file), the duplicate row is suppressed and only the single path row is shown.

<data-inspector> events

| Event | detail | | ------------------ | ------------------------------------------------------------------------------------------- | | inspector-close | null | | inspector-submit | { file: string \| string[], aggregationConfig: Partial<AggregationConfigValues> \| null } |

Theming

The dialog chrome reads host-adjustable CSS custom properties (light defaults shown):

| Variable | Default | Used for | | -------------- | --------- | ----------------------------------------- | | --di-bg | #fff | Dialog / surface background | | --di-fg | #1f2937 | Primary text | | --di-muted | #6b7280 | Secondary / muted text | | --di-border | #e5e7eb | Borders, dividers | | --di-surface | #f3f4f6 | Raised surfaces (rows, active tab, menus) | | --di-accent | #3b82f6 | Header icon, primary buttons, active tab |

Set any of these on the element or on any ancestor — for example, scoped to your app's dark-scheme selector — and the element follows:

html.dark data-inspector {
  --di-bg: #1e293b;
  --di-fg: #e5e7eb;
  --di-muted: #94a3b8;
  --di-border: #475569;
  --di-surface: #334155;
  --di-accent: #14b8a6; /* match your brand */
}

The host-set values always win. prefers-color-scheme: dark is used only as a fallback default when no host override is present, so the host's chosen scheme takes precedence over the OS. Error styling stays semantic (red) and is intentionally not themed.

Accessibility

The dialog uses role="dialog" + aria-modal="true" and is labelled by its title (aria-labelledby). Opening moves focus into the dialog and traps Tab/Shift+Tab within it; closing restores focus to the previously-focused element. Escape closes the dialog. The tabs expose role="tab"/tablist/tabpanel with aria-selected, and the close button has an aria-label.

ZarrPoller

const poller = new ZarrPoller(zarrUrl, options);
poller.start();
poller.stop();

| Option | Type | Default | | ---------------- | ------------------------------------------------------ | ----------------------------------- | | intervalMs | number | 2000 | | getAuthHeaders | () => Record<string, string> | reads freva_auth_token cookie | | getStatusUrl | (encoded: string) => string | Freva /zarr-utils/status endpoint | | onStatus | (statusCode: number, reason: string \| null) => void | — | | onError | (error: string) => void | — |

Backend status codes: 0 ok · 1 failed · 2 not found · 3 waiting · 4 processing · 5 gone

The second onStatus argument carries the optional reason string returned by the status endpoint (e.g. a human-readable explanation for a failed/not-found conversion), or null when none was provided.

detectZarrStore

Probe a URL to see whether it already points at a Zarr store. When it does, a host can skip the server-side conversion step and stream/render the store directly.

import { detectZarrStore } from "@freva-org/data-inspector";

const info = await detectZarrStore(url);
// { isZarr: true, version: 2, consolidated: true }

if (info.isZarr) {
  // skip server conversion — point GridLook at `url` directly
}

It probes <url>/.zmetadata (v2 consolidated) first, then <url>/zarr.json (v2/v3).

| Field | Type | Description | | -------------- | ---------------- | ------------------------------------------------------- | | isZarr | boolean | Whether the URL points at a readable Zarr store | | version | 2 \| 3 \| null | Detected Zarr format version (null when not a store) | | consolidated | boolean | Whether consolidated metadata is available (renderable) |

| Option | Type | Default | | ---------------- | ------------------------------ | ------------------------------- | | getAuthHeaders | () => Record<string, string> | reads freva_auth_token cookie | | timeoutMs | number | 5000 |

Client-side Zarr metadata (loadZarrMetadataHtml)

Parse a store's consolidated metadata (v2 .zmetadata or v3 zarr.json) in the browser and build the same xarray-style HTML repr that xarray renders in a notebook — no server round-trip. This replaces the removed server-side /zarr-utils/html endpoint.

import { loadZarrMetadataHtml } from "@freva-org/data-inspector";

const html = await loadZarrMetadataHtml(zarrUrl); // injects CSS into <head> once
el.output = html; // feed straight into <data-inspector>

Lower-level building blocks are also exported:

| Export | Signature | Description | | ---------------------- | ------------------------------------------------ | ------------------------------------------------------------ | | openDatasetMeta | (url, options?) => Promise<ZarrMetadataResult> | Fetch + parse metadata into a flat dataset or named groups | | buildXarrayRepr | (result: ZarrMetadataResult) => string | Render parsed metadata to the xarray HTML repr | | injectXarrayCss | (options?: { mainColor?: string }) => void | Inject the repr CSS into <head> once (idempotent) | | loadZarrMetadataHtml | (url, options?) => Promise<string> | Convenience: fetch + parse + render (injects CSS by default) |

loadZarrMetadataHtml options extend getAuthHeaders (same default as above) with mainColor (chunk-cube accent, defaults to window.MAIN_COLOR, then #9b7a52) and injectCss (set false to skip CSS injection).

Development

npm install
npm run dev
npm test
npm run typecheck
npm run build