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@pipeworx/mcp-gtex

v0.1.0

Published

GTEx — Genotype-Tissue Expression human gene-expression atlas

Vulnerabilities

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Links

Git

Maintainers

mojibake-aimojibake-ai

Keywords

mcpmcp-servermodel-context-protocolpipeworxgtex

Readme

mcp-gtex

GTEx — Genotype-Tissue Expression human gene-expression atlas

Part of Pipeworx — an MCP gateway connecting AI agents to 250+ live data sources.

Tools

| Tool | Description | |------|-------------| | gene | Gene metadata by Gencode id or symbol. | | median_expression | Median expression across tissues for a gene (TPM). | | top_expressed_genes | Top expressed genes for a tissue. | | single_tissue_eqtls | Significant single-tissue eQTLs for a gene. | | tissues | List of tissues. |

Quick Start

Add to your MCP client (Claude Desktop, Cursor, Windsurf, etc.):

{
  "mcpServers": {
    "gtex": {
      "url": "https://gateway.pipeworx.io/gtex/mcp"
    }
  }
}

Or connect to the full Pipeworx gateway for access to all 250+ data sources:

{
  "mcpServers": {
    "pipeworx": {
      "url": "https://gateway.pipeworx.io/mcp"
    }
  }
}

Using with ask_pipeworx

Instead of calling tools directly, you can ask questions in plain English:

ask_pipeworx({ question: "your question about Gtex data" })

The gateway picks the right tool and fills the arguments automatically.

More

License

MIT