runenv-r-tcr-disco

R run environment for TCR Discovery Block

How to add more dependencies (packages) to R run environment

1. Update version of NPM package in package.json.
2. Add new depdenencies specification to dependencies/ directory. Do it either by placing renv.lock file, either by placing init.R script that installs the dependencies. Use renv::install and other renv:: functions to operate with packages from the init.R script to properly fill package cache during run environment preparation. This will allow Platforma Backend to provide all dependencies when you run block
3. Commit changes and push them to main branch. CI run will take approx 40 minutes to release new version of package.

How to switch run environment to another version of R

1. Change version of R in 'main' entrypoint ('r-version' field).
2. Bump NPM package version in package.json.
3. Push changes to main branch.