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@threevl/hpo-lib

v0.0.4

Published

Server-agnostic Human Phenotype Ontology (.obo) parser and query resolvers

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Links

Git

Maintainers

threevlthreevl

Keywords

Readme

@threevl/hpo-lib

Server-agnostic library for loading Human Phenotype Ontology (HPO) .obo files and resolving term metadata, graph neighbourhood, and text search.

Usage

import {
  loadOntologyFromFile,
  getTerm,
  searchTerms,
} from "@threevl/hpo-lib";

const ontology = loadOntologyFromFile("/path/to/hp.obo");
const term = getTerm(ontology, "HP:0000001");
const hits = searchTerms(ontology, "seizure", 20);

API

See exported functions and types in src/index.ts.