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@univ-lehavre/atlas-crf

v2.0.6

Published

CRF Service - HTTP microservice for REDCap

Vulnerabilities

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  • 0Medium
  • 0Low

Links

Git

Maintainers

pochassetpochasset

Keywords

redcapclinical-researchapi-clienteffecttypescripthono

Readme

@univ-lehavre/atlas-crf

Microservice HTTP CRF pour exposer une API REST au-dessus de REDCap.

About

Ce service Hono encapsule le client REDCap Atlas et expose des routes, métadonnées projet, instruments, champs, records, PDF, liens de survey et recherche utilisateur par email. Il ajoute validation Effect, réponses d'erreur normalisées, rate limiting et documentation OpenAPI/Scalar côté serveur.

Features

  • Health checks: état du serveur REDCap, token et latence moyenne
  • Projet REDCap: version, informations projet, instruments, champs et noms d'export
  • Records: export, import, PDF et liens survey avec validation de requête
  • Utilisateurs: résolution d'un utilisateur REDCap par email

Usage

Server

Depuis le monorepo:

# Required environment variables
export REDCAP_API_URL=https://redcap.example.com/api/
export REDCAP_API_TOKEN=AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
export PORT=3000

# Start the server
pnpm -F @univ-lehavre/atlas-crf start

Le package exporte aussi createApp() pour construire l'application Hono dans des tests ou dans un runtime serveur personnalisé.

Server API

| Endpoint | Description | | ------------------------------------------- | ----------------------------- | | GET /health | Health check | | GET /api/v1/project/version | REDCap version | | GET /api/v1/project/info | Project information | | GET /api/v1/project/instruments | REDCap instruments | | GET /api/v1/project/fields | REDCap data dictionary fields | | GET /api/v1/project/export-field-names | Export field name mappings | | GET /api/v1/records | Export records | | POST /api/v1/records | Import records | | GET /api/v1/records/:recordId/pdf | Download record PDF | | GET /api/v1/records/:recordId/survey-link | Get survey link | | GET /api/v1/users/by-email?email=... | Find a user | | GET /openapi.json | OpenAPI specification | | GET /docs | Scalar documentation |

Scripts

pnpm -F @univ-lehavre/atlas-crf start:dev        # Development server
pnpm -F @univ-lehavre/atlas-crf build            # Production build
pnpm -F @univ-lehavre/atlas-crf test             # Unit tests
pnpm -F @univ-lehavre/atlas-crf start            # Start built server
pnpm -F @univ-lehavre/atlas-crf test:api         # API tests
pnpm -F @univ-lehavre/atlas-crf test:integration # Integration tests

Documentation

  • Documentation projet CRF
  • Documentation interactive du service: GET /docs
  • Spécification OpenAPI du service: GET /openapi.json

Organization

This package is part of Atlas, a set of tools developed by Le Havre Normandie University to facilitate research and collaboration between researchers.

Atlas is developed as part of two projects led by Le Havre Normandie University:

License

MIT