havana-apollo-plugin

This plugin provides custom Havana related components/features for Apollo3.

• Biotypes Component: Updates the feature type, biotype and creates/deletes CDS based on the biotype
• Remark and Hidden remark for gene/transcript: Adds a remark and hidden remark field to the transcript widget
• Havana Save Component: Save button which syncs data from Apollo3 to Havana

Development

To develop against JBrowse Web and Apollo3:

• Start a development version of JBrowse Web (see here)
• Start a development version of Apollo3
• In this project, run yarn start (or npm run start)
• Add the following to your Apollo3 config:

  plugins: [
    {
        name: 'HavanaApolloPlugin',
        url: 'http://localhost:9001/dist/havana-apollo-plugin.umd.development.js'
    }
  ],

• When you make changes to your plugin, it will automatically be re-built. You can then refresh JBrowse Web to see the changes.

Publishing to NPM

Once you have developed your plugin, you can publish it to NPM. Remember to remove "private": true from package.json before doing so.